Datasets (82)

Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [scRNA-seq]

The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq]

Expanded repertoire of RNA-editing-based detection for RNA binding protein interactions (2)

Expanded repertoire for RNA-editing-based detection for RNA binding protein interactions (3)

Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [RNA-seq]

Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_mouse]

Persistent mRNA localization defects and cell death in ALS neurons caused by transient cellular stress

Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [tia1_eclip]

Gene Expression Signatures of Motor Neuron Populations Isolated from Sporadic ALS

Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes

The RNA helicase DDX6 regulation in human skeletal myoblasts [eCLIP-seq]

Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies

Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [array]

The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells

Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [RNA-Seq_Stability]

FLARE: A fast and flexible peak-calling pipeline for identifying RNA editing foci

Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses

An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [isstamp_lr]

Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites

The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [ChIP-Seq]

An in situ method for identification of transcriptome-wide protein-RNA interactions in cells

Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [STAMP_new_eclip]

Disrupted processing of long pre-mRNAs and widespread RNA missplicing are components of neuronal vulnerability from loss of nuclear TDP-43

Long-read Ribo-STAMP simultaneously measures transcription and translation at full length isoform resolution

The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [RNA-seq2]