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Mudskipper detects combinatorial RNA binding protein interactions in multiplexed CLIP data.

Cell genomics · 2024 · 4(7): 100603

The uncovering of protein-RNA interactions enables a deeper understanding of RNA processing. Recent multiplexed crosslinking and immunoprecipitation (CLIP) technologies such as antibody-barcoded eCLIP (ABC) dramatically increase the throughput of mapping RNA binding protein (RBP) binding sites. However, multiplex CLIP datasets …

PMID 38955188 DOI ↗